Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Ile) - Chloroflexia

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ile-tRNA
Phylum: Chloroflexi
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 1 1
Chloroflexus sp. Y-400-fl 1 1
Roseiflexus castenholzii DSM 13941 1 1
Roseiflexus sp. RS-1 1 1
Herpetosiphon aurantiacus ATCC 23779 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ileS
*
Chloroflexus aggregans DSM 9485

Site:
position = -309
score = 69.65
sequence = CAACGGCGATGACGG...

Gene: Cagg_0718: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Chloroflexus sp. Y-400-fl

Site:
position = -309
score = 90.73
sequence = TAACGGCGATGACGG...

Gene: Chy400_2909: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Roseiflexus castenholzii DSM 13941

Site:
position = -296
score = 86.48
sequence = CAAAGGCCGTGACGG...

Gene: Rcas_0322: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Roseiflexus sp. RS-1

Site:
position = -302
score = 86.82
sequence = CAAAGGCTGTGACGG...

Gene: RoseRS_0727: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -302
score = 92.78
sequence = GTCACAGGCGTTGAC...

Gene: Haur_2971: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD