Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog PyrR - Chloroflexia

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Phylum: Chloroflexi
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Chloroflexus aggregans DSM 9485 3 1
Chloroflexus sp. Y-400-fl 3 1
Roseiflexus castenholzii DSM 13941
Roseiflexus sp. RS-1
Herpetosiphon aurantiacus ATCC 23779 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Haur_3989
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
*
Herpetosiphon aurantiacus ATCC 23779

Site:
position = -124
score = 42.07
sequence = AGTCCTTTAAATGCG...

Gene: Haur_3989: Glycosyl transferase
Glycosyl transferase
pyrR
*
Chloroflexus aggregans DSM 9485

Site:
position = -160
score = 53.1
sequence = TGCAACCTTTAATAC...

Gene: Cagg_3362: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Chloroflexus sp. Y-400-fl

Site:
position = -152
score = 49.13
sequence = TCGCCTTTAATACAG...

Gene: Chy400_2042: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2433: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
 
Roseiflexus sp. RS-1

Gene: RoseRS_2864: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3990: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
clpC
 
Chloroflexus aggregans DSM 9485
 
Chloroflexus sp. Y-400-fl
 
Roseiflexus castenholzii DSM 13941
 
Roseiflexus sp. RS-1
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3991: ATP-dependent Clp protease, ATP-binding subunit ClpC
ATP-dependent Clp protease, ATP-binding subunit ClpC
pyrB
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3361: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2043: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2434: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2863: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_3992: Aspartate carbamoyltransferase (EC 2.1.3.2)
Aspartate carbamoyltransferase (EC 2.1.3.2)
pyrC
 
Chloroflexus aggregans DSM 9485

Gene: Cagg_3360: Dihydroorotase (EC 3.5.2.3)
 
Chloroflexus sp. Y-400-fl

Gene: Chy400_2044: Dihydroorotase (EC 3.5.2.3)
 
Roseiflexus castenholzii DSM 13941

Gene: Rcas_2435: Dihydroorotase (EC 3.5.2.3)
 
Roseiflexus sp. RS-1

Gene: RoseRS_2862: Dihydroorotase (EC 3.5.2.3)
 
Herpetosiphon aurantiacus ATCC 23779

Gene: Haur_4100: Dihydroorotase (EC 3.5.2.3)
Dihydroorotase (EC 3.5.2.3)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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