Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog SAM - Lactobacillaceae

Properties
Regulator type: RNA regulatory element
Name: SAM
RFAM: RF00162
Regulation mode:
Biological process: Methionine biosynthesis
Effector: S-adenosylmethionine
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Oenococcus oeni PSU-1 1 1
Lactobacillus reuteri JCM 1112
Lactobacillus helveticus DPC 4571
Lactobacillus fermentum IFO 3956
Lactobacillus salivarius subsp. salivarius UCC118
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Lactobacillus acidophilus NCFM
Lactobacillus johnsonii NCC 533
Lactobacillus plantarum WCFS1
Lactobacillus casei ATCC 334
Lactobacillus brevis ATCC 367
Lactobacillus sakei subsp. sakei 23K
Pediococcus pentosaceus ATCC 25745
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 1 1
Lactobacillus rhamnosus GG
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
metK
*
Oenococcus oeni PSU-1

Site:
position = -144
score = 32.36
sequence = ACCTATTCAGAGCGT...

Gene: OEOE_0838: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus reuteri JCM 1112

Gene: LAR_1229: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus helveticus DPC 4571

Gene: lhv_1731: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus fermentum IFO 3956

Gene: LAF_1358: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus salivarius subsp. salivarius UCC118

Gene: LSL_0441: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Gene: LBUL_1455: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus acidophilus NCFM

Gene: LBA1622: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus johnsonii NCC 533

Gene: LJ0677: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus plantarum WCFS1

Gene: lp_1301: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus casei ATCC 334

Gene: LSEI_0877: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus brevis ATCC 367

Gene: LVIS_1523: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus sakei subsp. sakei 23K

Gene: LSA0468: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Pediococcus pentosaceus ATCC 25745

Gene: PEPE_0641: S-adenosylmethionine synthetase (EC 2.5.1.6)
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Site:
position = -231
score = 35.53
sequence = ACAGCTATCAAGAGT...

Gene: LEUM_1697: S-adenosylmethionine synthetase (EC 2.5.1.6)
 
Lactobacillus rhamnosus GG

Gene: LGG_00842: S-adenosylmethionine synthetase (EC 2.5.1.6)
S-adenosylmethionine synthetase (EC 2.5.1.6)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD