Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Val) - Bacillales

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Val-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 1 1
Bacillus amyloliquefaciens FZB42 1 1
Bacillus pumilus SAFR-032 1 1
Bacillus licheniformis DSM 13 1 1
Anoxybacillus flavithermus WK1 1 1
Geobacillus kaustophilus HTA426 1 1
Bacillus cereus ATCC 14579 1 1
Bacillus halodurans C-125 1 1
Bacillus clausii KSM-K16 1 1
Oceanobacillus iheyensis HTE831 1 1
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
valS
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -283
score = 126.09
sequence = TACACCTGCTTAGAA...

Gene: BSU28090: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -281
score = 117.56
sequence = TACACCTGCTTTGAA...

Gene: RBAM_025140: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Bacillus pumilus SAFR-032

Site:
position = -290
score = 112.19
sequence = ATCATAAGCGTGGAT...

Gene: BPUM_2449: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Bacillus licheniformis DSM 13

Site:
position = -295
score = 123.49
sequence = ATCACCCGCTTTGAA...

Gene: BLi02938: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Anoxybacillus flavithermus WK1

Site:
position = -258
score = 129.25
sequence = AAAAAGCGAAGATAG...

Gene: Aflv_0614: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Geobacillus kaustophilus HTA426

Site:
position = -337
score = 116.83
sequence = GACAAAAGCGAAGAC...

Gene: GK2638: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Bacillus cereus ATCC 14579

Site:
position = -270
score = 135.53
sequence = TATAAATGCCTTGAA...

Gene: BC4465: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Bacillus halodurans C-125

Site:
position = -287
score = 121.2
sequence = GTTAAATGCACAGAT...

Gene: BH3038: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Bacillus clausii KSM-K16

Site:
position = -265
score = 128.1
sequence = ATAAAAAGCGATGAG...

Gene: ABC2621: Valyl-tRNA synthetase (EC 6.1.1.9)
*
Oceanobacillus iheyensis HTE831

Site:
position = -277
score = 115.75
sequence = AATAAATGCGAAGAT...

Gene: OB2061: Valyl-tRNA synthetase (EC 6.1.1.9)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_4429: Valyl-tRNA synthetase (EC 6.1.1.9)
Valyl-tRNA synthetase (EC 6.1.1.9)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD