Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Phe) - Staphylococcaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Phe-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Staphylococcus aureus subsp. aureus N315 2 1
Staphylococcus capitis SK14 2 1
Staphylococcus epidermidis ATCC 12228 2 1
Staphylococcus carnosus subsp. carnosus TM300 2 1
Staphylococcus haemolyticus JCSC1435 2 1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 2 1
Macrococcus caseolyticus JCSC5402 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pheS
*
Staphylococcus aureus subsp. aureus N315

Site:
position = -300
score = 75.8
sequence = ATAAACCAATAAAAA...

Gene: SA0985: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
*
Staphylococcus capitis SK14

Site:
position = -301
score = 81.21
sequence = ATCAACCGATAAAAA...

Gene: STACA0001_2150: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
*
Staphylococcus epidermidis ATCC 12228

Site:
position = -298
score = 74.7
sequence = AATAACCTATAAAAA...

Gene: SE0831: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
*
Staphylococcus carnosus subsp. carnosus TM300

Site:
position = -279
score = 76.95
sequence = TATATGCTGATAAAA...

Gene: Sca_0756: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
*
Staphylococcus haemolyticus JCSC1435

Site:
position = -284
score = 86.83
sequence = AATATAACCGATAAA...

Gene: SH1823: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Site:
position = -288
score = 73.23
sequence = ATATGAACCCATAAA...

Gene: SSP1657: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
*
Macrococcus caseolyticus JCSC5402

Site:
position = -248
score = 71.6
sequence = TACATCGCCGTTTTA...

Site:
position = -248
score = 71.6
sequence = TACATCGCCGTTTTA...

Gene: MCCL_1327: Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)
pheT
 
Staphylococcus aureus subsp. aureus N315

Gene: SA0986: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
 
Staphylococcus capitis SK14

Gene: STACA0001_2151: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
 
Staphylococcus epidermidis ATCC 12228

Gene: SE0832: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
 
Staphylococcus carnosus subsp. carnosus TM300

Gene: Sca_0757: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
 
Staphylococcus haemolyticus JCSC1435

Gene: SH1822: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
 
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Gene: SSP1656: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
 
Macrococcus caseolyticus JCSC5402

Gene: MCCL_1326: Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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