Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Ile) - Corynebacteriaceae

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ile-tRNA
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Corynebacterium glutamicum ATCC 13032 1 1
Corynebacterium efficiens YS-314 1 1
Corynebacterium diphtheriae NCTC 13129 1 1
Corynebacterium aurimucosum ATCC 700975 1 1
Corynebacterium jeikeium K411 1 1
Corynebacterium urealyticum DSM 7109 1 1
Corynebacterium amycolatum SK46 1 1
Corynebacterium kroppenstedtii DSM 44385 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ileS
*
Corynebacterium glutamicum ATCC 13032

Site:
position = -236
score = 36.21
sequence = GGCGGAGGTTATGAT...

Gene: cg2359: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium efficiens YS-314

Site:
position = -255
score = 14.97
sequence = GGCGAAGGCGATGAT...

Gene: CE2043: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium diphtheriae NCTC 13129

Site:
position = -236
score = 43.29
sequence = ATAGACGACGCTGAT...

Gene: DIP1589: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium aurimucosum ATCC 700975

Site:
position = -204
score = 38.6
sequence = GGCGTATGCAGTGAG...

Gene: cauri_1656: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium jeikeium K411

Site:
position = -269
score = 33.03
sequence = AACACGCATCGATCC...

Gene: jk0760: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium urealyticum DSM 7109

Site:
position = -131
score = 32.12
sequence = CAAGATAAGAGGAAG...

Gene: cur_1195: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium amycolatum SK46

Site:
position = -268
score = 32.33
sequence = AATACGCGCAATGAG...

Gene: CORAM0001_1097: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
*
Corynebacterium kroppenstedtii DSM 44385

Site:
position = -355
score = 36.42
sequence = CGTCCGCTATGATCC...

Gene: ckrop_0758: Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Isoleucyl-tRNA synthetase (EC 6.1.1.5)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD