Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulog T-box(Asn) - Bacillales

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Asn-tRNA
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Bacillus subtilis subsp. subtilis str. 168 2 1
Bacillus amyloliquefaciens FZB42 2 1
Bacillus pumilus SAFR-032
Bacillus licheniformis DSM 13 2 1
Anoxybacillus flavithermus WK1 2 1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579 2 2
Bacillus halodurans C-125 2 1
Bacillus clausii KSM-K16 2 1
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
asnA
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
*
Bacillus cereus ATCC 14579

Site:
position = -328
score = 113.72
sequence = AAACGACTATGAAAG...

Gene: BC1746: Aspartate--ammonia ligase (EC 6.3.1.1)
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Aspartate--ammonia ligase (EC 6.3.1.1)
 
CRON 2.
asnS2
 
Bacillus subtilis subsp. subtilis str. 168
 
Bacillus amyloliquefaciens FZB42
 
Bacillus pumilus SAFR-032
 
Bacillus licheniformis DSM 13
 
Anoxybacillus flavithermus WK1
 
Geobacillus kaustophilus HTA426
*
Bacillus cereus ATCC 14579

Site:
position = -305
score = 109.78
sequence = ATGAAAGACGATGAT...

Gene: BC4559: Asparaginyl-tRNA synthetase (EC 6.1.1.22)
 
Bacillus halodurans C-125
 
Bacillus clausii KSM-K16
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Asparaginyl-tRNA synthetase (EC 6.1.1.22)
 
CRON 3.
hisS
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -323
score = 104.7
sequence = ATTTGAACCAATAAT...

Gene: BSU27560: Histidyl-tRNA synthetase (EC 6.1.1.21)
*
Bacillus amyloliquefaciens FZB42

Site:
position = -297
score = 99.1
sequence = TTTTGAACCGATAAT...

Gene: RBAM_024670: Histidyl-tRNA synthetase (EC 6.1.1.21)
 
Bacillus pumilus SAFR-032
*
Bacillus licheniformis DSM 13

Site:
position = -321
score = 101.96
sequence = AGCTGAACTGAAGAT...

Gene: BLi02882: Histidyl-tRNA synthetase (EC 6.1.1.21)
*
Anoxybacillus flavithermus WK1

Site:
position = -281
score = 121.33
sequence = TCTCGCCGATGATGG...

Gene: Aflv_0730: Histidyl-tRNA synthetase (EC 6.1.1.21)
 
Geobacillus kaustophilus HTA426

Gene: GK2573: Histidyl-tRNA synthetase (EC 6.1.1.21)
 2
Bacillus cereus ATCC 14579

Gene: BC4398: Histidyl-tRNA synthetase (EC 6.1.1.21)

Gene: BC3317: Histidyl-tRNA synthetase (EC 6.1.1.21)
*
Bacillus halodurans C-125

Site:
position = -367
score = 137.86
sequence = GGTTTCCGATGAAGA...

Gene: BH1251: Histidyl-tRNA synthetase (EC 6.1.1.21)
*2
Bacillus clausii KSM-K16

Site:
position = -274
score = 119.98
sequence = TAAAACCAATGATAA...

Gene: ABC1576: Histidyl-tRNA synthetase (EC 6.1.1.21)

Gene: ABC3310: Histidyl-tRNA synthetase (EC 6.1.1.21)
 
Oceanobacillus iheyensis HTE831

Gene: OB2020: Histidyl-tRNA synthetase (EC 6.1.1.21)
 2
Paenibacillus sp. JDR-2

Gene: Pjdr2_4376: Histidyl-tRNA synthetase (EC 6.1.1.21)

Gene: Pjdr2_0932: Histidyl-tRNA synthetase (EC 6.1.1.21)
Histidyl-tRNA synthetase (EC 6.1.1.21)
aspS
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU27550: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_024660: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Bacillus pumilus SAFR-032

Gene: BPUM_2396: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Bacillus licheniformis DSM 13

Gene: BLi02881: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Anoxybacillus flavithermus WK1

Gene: Aflv_0731: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Geobacillus kaustophilus HTA426

Gene: GK2572: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Bacillus cereus ATCC 14579

Gene: BC4397: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Bacillus halodurans C-125

Gene: BH1252: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Bacillus clausii KSM-K16

Gene: ABC1577: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Oceanobacillus iheyensis HTE831

Gene: OB2019: Aspartyl-tRNA synthetase (EC 6.1.1.12)
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_4375: Aspartyl-tRNA synthetase (EC 6.1.1.12)
Aspartyl-tRNA synthetase (EC 6.1.1.12)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD