Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 4.0 --

Regulons of Roseiflexus sp. RS-1

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF AcrR Multidrug efflux; Multidrug resistance 1 1
TF Cagg_3094 Creatinine utilization 1 2
TF Caur_3401 Multidrug resistance; Multidrug efflux 1 1
TF Caur_3448 Sugar utilization 1 2
TF Caur_3587 2 2
TF FetR Iron ion, (Fe2+) Iron homeostasis 3 3
TF HcpR Nitric oxide Nitrosative stress response 1 1
TF HrcA Heat shock Heat shock response 2 3
TF LexA DNA damage SOS response 10 11
TF MhpR Utilization of aromatic compounds 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 3 3
TF NagR N-acetylglucosamine N-acetylglucosamine utilization 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 1
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 4 5
TF Rcas_2304 Amino acid utilization 1 1
TF Rcas_3562 Alpha-galactosides utilization 1 1
TF Rex NADH Energy metabolism 10 11
TF RhaR Rhamnose Rhamnose utilization 1 3
TF SufR Iron-sulfur cluster redox state Iron-sulfur cluster biogenesis 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 1 1
TF Zur2 Zinc ion, (Zn2+) Zinc homeostasis 5 5
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 3 3
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 2 2
RNA Glycine Glycine Glycine metabolism 1 2
RNA L10_leader Ribosome biogenesis 1 1
RNA SAM S-adenosylmethionine Methionine biosynthesis 2 2
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 1 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 4 4
RNA glmS Glucosamine-6-phosphate Amino sugar metabolism 1 1
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